กก

LINKS

Arabidopsis Functional Genomics Consortium (AFGC) - The AFGC is a NSF-funded collaboration designed to understand gene function in Arabidopsis by integrating two approaches: Microarray Expression Analysis and T-DNA Gene Knockouts.

The Baker Lab - The Baker Lab's goal is to understand the biochemical and molecular bases of plant resistance to pathogen diseases. The Lab's research focuses on elucidating the mechanism of plant-pathogen recognition and signal transduction leading to the induction of disease resistance responses. The Lab's experimental system consists of the tobacco mosaic virus (TMV) resistance gene, N, encoding a putative cytoplasmic receptor, disease-resistant plant hosts harboring N, and the classical plant pathogen, TMV.

Clemson University Genomic Institute

Genomic analysis of grain quality traits in corn -- University of Delaware

ISU Maize Genome Project - Contains ESTs in FASTA format, and also InDel Polymorphism sequences.

MaizeDB: the Maize Genome Database - MaizeDB is a comprehensive source of information on the genetics and molecular biology of maize, and is a service of USDA/ARS; it is enhanced by NSF support to the Missouri Maize Project.

Medicago truncatula as the Nodal Species for Comparative and Functional Legume Genomics

Missouri Maize Project - The Missouri Maize Project is the inaugural project of the University of Missouri's Maize Genomics Center. Their overall goal is to develop a physical map of maize that is anchored to the genetic map via molecular and trait markers and to develop the data management resources to allow analysis, curation, and dissemination of the mapping information.

Plant Biotechnology and Genome Center - PBGC's research objectives are to develop a physical map of the soybean genome and to integrate the physical map with the genetic map. The ultimate goal is to significantly accelerate discovery, cloning, manipulation, and utilization of soybean genes of agronomic importance for genetic improvement and agricultural production. The research will also provide all soybean researchers with electronic access to bacterial artificial chromosome (BAC) clones encompassing regions likely to contain genes of economic importance.

The Plant Chromatin Database - ChromDB is a resource cataloging information on proteins that control gene expression by changing the structure and function of chromatin. ChromDB is the result of a collaboration of ten labs at six different universities and is a Plant Genome project funded by the National Science Foundation. All the data generated by this project are publicly available through this site.

Gene, protein and cDNA sequences for Arabidopsis and maize chromatin genes have been updated and now include EST matches. The gene model descriptions now have details about which predicted splice junctions are verified by EST and/or RT-PCR and indicate where changes to the original gene models have been made.

The Plant Genome Initiative at Rutgers - PGIR's current focus is on the Comparative Genomics between Maize, Sorghum, and Rice. They also collaborate on the development of new Ac-based insertion lines of maize using the biolistic transformation method.

The Schnable Lab -- Iowa State University - The Schnable Lab's primary goal directs their genetic research is crop improvement. They approach this goal from several different directions, researching individual genes and processes as well as comprehensive plant genomics. Emphasis areas include: Acetyl-CoA, Cytoplasmic Male Sterility, Genomics, Cuticular Wax, Meiotic Recombination, and Root Biology.

SolGenes -- Genome Database for the Solanaceae - SolGenes is one of several plant genome databases supported by the USDA/NAL Plant Genome Research Program. It serves the international community of geneticists and breeders who work with tomatoes, potatoes, peppers, and other Solanaceous species. It depends upon that community, both for additional data and for corrections and suggestions.

SolGenes, in the narrow sense, is a database stored in the ACEDB database software. Users are free to download both the data and software necessary to create a copy of SolGenes on their own Unix or Windows 95 or NT computer. The alternative, accessing SolGenes via the World Wide Web, assures users the most up-to-date version of SolGenes. On the Web, users encounter an interface (i.e., other software) which directs their queries to ACEDB and displays the information that ACEDB retrieves.

Stress Functional Genomics Consortium

SynTom - The Arabidopsis-Tomato Synteny Database at Cornell University - The goals of the Solanaceae Genome Network include providing genomic information about solanaceous species (nightshade family - includes potato, tomato, pepper, eggplant, tobacco, and petunia) in a comparative format and tying that information to the Arabidopsis genome. In this site you will find comparative maps, marker sequences, EST sequences, phylogenetic information, and links to related web sites.

TIGR The Institute for Genomic Research - The Institute for Genomic Research is a not-for-profit research institute with interests in structural, functional, and comparative analysis of genomes and gene products in viruses, eubacteria, pathogenic bacteria, archaea, and eukaryotes (both plant and animal), including humans.

TreeGenes (class - query) / Dendrome - Dendrome is a collection of forest tree genome databases and other forest genetic information resources for the international forest genetics community. Dendrome is a project of the Institute of Forest Genetics, Pacific Southwest Research Station, USDA Forest Service. Dendrome is part of a larger collaborative effort to construct genome databases for major crop and forest species.

The primary genome database of Dendrome is called TreeGenes. TreeGenes is an ACeDB style database that includes genetic map, DNA sequence, germplasm, and other related information for a large number of forest tree species.

University of Wisconsin - Madison Arabidopsis Knockout Facility Overview - Offers a user-fee service facility to provide "knock-out" Arabidopsis mutant plants for the research community.

Wheat genomes: structure and function - The long term goal of this project is to decipher the chromosomal location and biological function of all genes in the wheat (Triticum spp.) genomes. This knowledge will greatly enhance our understanding of the biology of the wheat plant and create a new paradigm for the improvement of this exceedingly important crop. Moreover, because of the extensive genetic and metabolic conservation among species in the grass family, efforts to decipher gene function in wheat and its close allies will work synergistically with similar efforts in maize, rice, sorghum, and other crops in the grass family to arrive at a global understanding of the function, structure, and evolution of genomes.

ZmDB Maize Genome Database - Home of the NSF project Maize Gene Discovery, DNA Sequencing, and Phenotypic Analysis. The goals of the project are [1] to discover maize genes using EST sequencing and engineered Mu (RescueMu) tagging, and [2] to develop new tools to facilitate gene mapping and phenotypic analysis. ZmDB is a repository and analysis tool for sequence, expression, and phenotype data generated in this project. The site also provides online ordering of the materials generated in this project, including EST clones, seeds of mutant plants, and microarrays of amplified EST and genomic DNA sequences.